STRINGSTRING
ABI3 protein (Solanum lycopersicum) - STRING interaction network
ABI3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABI3ABI3 (579 aa)    
Predicted Functional Partners:
Solyc09g009490.2.1
Uncharacterized protein (426 aa)
       
 
  0.816
Solyc08g067290.2.1
Uncharacterized protein (312 aa)
       
 
  0.795
Solyc09g063010.2.1
Uncharacterized protein (557 aa)
       
 
  0.762
Solyc11g012750.1.1
Uncharacterized protein (152 aa)
     
   
  0.513
Solyc04g015060.1.1
Uncharacterized protein (237 aa)
     
   
  0.513
Solyc04g071960.2.1
Uncharacterized protein (300 aa)
           
  0.489
Solyc04g071940.2.1
Uncharacterized protein (275 aa)
           
  0.489
Solyc02g090890.2.1
Zeaxanthin epoxidase, chloroplastic ; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Plays an important role in resistance to stresses, seed development and dormancy (669 aa)
           
  0.482
Solyc03g044300.2.1
APETALA2-like protein (401 aa)
           
  0.481
Solyc02g093150.2.1
AP2 transcription factor SlAP2c (446 aa)
           
  0.481
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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