• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101264942 protein (Solanum lycopersicum) - STRING interaction network
"101264942" - Plasmodesmata-located protein 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264942Plasmodesmata-located protein 1 (296 aa)    
Predicted Functional Partners:
101253732
Lysm domain GPI-anchored protein 2 precursor (345 aa)
           
  0.868
101246333
Uncharacterized protein; C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (1047 aa)
           
  0.852
101268437
annotation not available (196 aa)
           
  0.774
pds
Phytoene dehydrogenase, chloroplastic/chromoplastic; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene (583 aa)
           
  0.773
101260498
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (219 aa)
           
  0.698
101267334
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (548 aa)
           
  0.684
101257018
Uncharacterized protein; TRICHOME BIREFRINGENCE-LIKE 13 (407 aa)
           
  0.655
101262238
Uncharacterized protein; Tobamovirus multiplication 2A (284 aa)
           
  0.597
Solyc01g056620.2.1
double-stranded-RNA-binding protein 4 (288 aa)
           
  0.581
101246924
Uncharacterized protein; DEAD/DEAH box helicase, putative (1154 aa)
           
  0.571
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]