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STRINGSTRING
101250130 protein (Solanum lycopersicum) - STRING interaction network
"101250130" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250130annotation not available (381 aa)    
Predicted Functional Partners:
101256661
Zinc finger (C2H2 type) family protein (382 aa)
           
  0.571
101253786
Ca(2)-dependent phospholipid-binding protein (Copine) family (451 aa)
           
  0.561
Solyc04g008020.2.1
annotation not available (352 aa)
           
  0.560
101244592
Uncharacterized protein; Translocon at the outer envelope membrane of chloroplasts 75-III (812 aa)
       
 
  0.533
101245289
Uncharacterized protein; Copine (Calcium-dependent phospholipid-binding protein) family (420 aa)
           
  0.522
Solyc12g077540.1.1
annotation not available (301 aa)
           
  0.521
101267995
Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (301 aa)
       
 
  0.519
Solyc03g095220.2.1
annotation not available (259 aa)
       
 
  0.519
Solyc04g079270.2.1
annotation not available (524 aa)
       
 
  0.514
101255084
Uncharacterized protein; NADH-ubiquinone oxidoreductase B18 subunit, putative (100 aa)
     
   
  0.514
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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