STRINGSTRING
Solyc06g084410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g084410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g084410.2.1Uncharacterized protein (120 aa)    
Predicted Functional Partners:
Solyc07g047770.2.1
Uncharacterized protein (1235 aa)
       
  0.956
Solyc05g015610.2.1
Uncharacterized protein (1032 aa)
       
  0.956
Solyc04g008110.2.1
Uncharacterized protein (993 aa)
       
  0.956
ETR6
Ethylene receptor (754 aa)
       
 
  0.944
Solyc10g079600.1.1
Uncharacterized protein (227 aa)
       
 
  0.910
Solyc02g071220.2.1
Uncharacterized protein (166 aa)
       
 
  0.910
Solyc12g099720.1.1
Uncharacterized protein (740 aa)
       
 
  0.791
Solyc12g062760.1.1
Uncharacterized protein (88 aa)
       
 
  0.791
Solyc12g044870.1.1
Uncharacterized protein (166 aa)
       
 
  0.791
Solyc12g038690.1.1
Uncharacterized protein (64 aa)
       
 
  0.791
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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