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STRINGSTRING
101258381 protein (Solanum lycopersicum) - STRING interaction network
"101258381" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258381annotation not available (608 aa)    
Predicted Functional Partners:
101251215
Uncharacterized protein; Chloroplast signal recognition particle 54 kDa subunit (567 aa)
   
   
  0.921
101250331
Ribosomal L5P family protein (265 aa)
     
        0.870
101255645
annotation not available (291 aa)
     
      0.869
101245790
annotation not available (290 aa)
     
      0.869
101245909
Uncharacterized protein; RNA binding;GTP binding; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (438 aa)
   
   
  0.867
101252524
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (545 aa)
     
        0.862
101256124
Ribosomal protein L1p/L10e family; Belongs to the universal ribosomal protein uL1 family (338 aa)
     
        0.862
101251698
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (580 aa)
     
        0.860
101254712
Ribosomal protein L4 (288 aa)
     
      0.856
101254024
Antitermination NusB domain-containing protein (291 aa)
     
        0.856
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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