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STRINGSTRING
101246936 protein (Solanum lycopersicum) - STRING interaction network
"101246936" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246936annotation not available (1251 aa)    
Predicted Functional Partners:
101252654
annotation not available (510 aa)
     
   
  0.644
101248688
annotation not available (411 aa)
     
 
  0.640
101246089
Uncharacterized protein; RNA polymerase II transcription mediators (2262 aa)
     
   
  0.638
101256736
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
 
  0.638
101256389
Uncharacterized protein; COSII_At1g32130 (523 aa)
           
  0.637
101268085
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (654 aa)
           
  0.571
Solyc09g060080.2.1
annotation not available (1976 aa)
           
  0.565
Solyc06g083420.1.1
annotation not available (1908 aa)
           
  0.565
Solyc12g013600.1.1
annotation not available (1629 aa)
         
  0.532
Solyc12g013590.1.1
annotation not available (1208 aa)
         
  0.532
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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