STRINGSTRING
Solyc06g084590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g084590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g084590.2.1Uncharacterized protein (492 aa)    
Predicted Functional Partners:
Solyc03g113840.1.1
Uncharacterized protein (462 aa)
   
 
  0.955
Solyc01g087610.2.1
Uncharacterized protein (807 aa)
 
   
  0.650
Solyc12g035430.1.1
Uncharacterized protein (76 aa)
   
   
  0.575
Solyc03g113820.1.1
Uncharacterized protein (480 aa)
   
   
  0.575
Solyc00g112930.2.1
Annotation not available (75 aa)
   
   
  0.575
Solyc01g098980.2.1
Uncharacterized protein (1618 aa)
           
  0.433
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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