STRINGSTRING
Solyc07g005080.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g005080.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g005080.1.1Uncharacterized protein (386 aa)    
Predicted Functional Partners:
Solyc05g054710.2.1
Beta-hexosaminidase 2 (552 aa)
   
   
  0.698
Solyc01g081610.2.1
Beta-hexosaminidase 1 (575 aa)
   
   
  0.692
Solyc11g008810.1.1
Beta-hexosaminidase (497 aa)
   
   
  0.690
CHI3
Acidic 26 kDa endochitinase ; Defense against chitin-containing fungal pathogens (253 aa)
 
   
  0.657
CHI17
Acidic 27 kDa endochitinase ; Defense against chitin-containing fungal pathogens (247 aa)
 
   
  0.654
Solyc09g098540.2.1
Uncharacterized protein (319 aa)
 
   
  0.544
Solyc10g074360.1.1
Uncharacterized protein (154 aa)
 
   
  0.542
Solyc12g098810.1.1
Uncharacterized protein (328 aa)
 
   
  0.542
Solyc10g074390.1.1
Uncharacterized protein (216 aa)
 
   
  0.537
Solyc02g082960.2.1
Uncharacterized protein (273 aa)
 
   
  0.534
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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