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STRINGSTRING
101252601 protein (Solanum lycopersicum) - STRING interaction network
"101252601" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252601Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (1861 aa)    
Predicted Functional Partners:
101257969
Uncharacterized protein; Plastid transcriptionally active 16 (496 aa)
     
        0.857
Solyc01g105460.2.1
UbiA prenyltransferase family protein (391 aa)
     
        0.849
101246952
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 13 growth stages; H /.../Blast hits to 49 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (190 aa)
     
        0.846
101245558
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1048 aa)
     
        0.830
101245798
annotation not available (468 aa)
       
 
  0.828
101263066
annotation not available (988 aa)
           
  0.806
Solyc12g049500.1.1
annotation not available (508 aa)
           
  0.797
Solyc11g069690.1.1
Uncharacterized protein; PDI-like 5-1 (125 aa)
           
  0.797
101255926
Lipase class 3 family protein (789 aa)
           
  0.797
101245362
annotation not available (808 aa)
           
  0.797
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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