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STRINGSTRING
Solyc07g006130.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g006130.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g006130.1.1annotation not available (405 aa)    
Predicted Functional Partners:
101244963
Uncharacterized protein; Translation elongation factor EF1A/initiation factor IF2gamma family protein (534 aa)
   
 
  0.988
Solyc03g118980.2.1
annotation not available (162 aa)
   
 
  0.988
101254120
annotation not available (606 aa)
     
 
  0.988
Solyc07g008340.2.1
annotation not available (578 aa)
     
 
  0.988
Solyc03g118990.1.1
annotation not available (70 aa)
     
 
  0.985
101258363
annotation not available (280 aa)
   
 
  0.956
101254082
annotation not available (280 aa)
   
 
  0.956
101268580
annotation not available (148 aa)
     
 
  0.955
101265118
annotation not available (148 aa)
     
 
  0.955
101262297
annotation not available (206 aa)
     
 
  0.949
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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