STRINGSTRING
Solyc07g006340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g006340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g006340.2.1Uncharacterized protein (284 aa)    
Predicted Functional Partners:
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
        0.523
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
   
        0.523
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
        0.518
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
        0.517
Solyc03g007830.2.1
Uncharacterized protein (177 aa)
   
          0.517
Solyc06g084470.2.1
Uncharacterized protein (172 aa)
   
          0.515
Solyc04g011900.2.1
Uncharacterized protein (330 aa)
   
        0.511
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
          0.508
Solyc05g013480.2.1
Uncharacterized protein (353 aa)
   
          0.504
Solyc02g067120.2.1
Uncharacterized protein (241 aa)
   
          0.501
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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