STRINGSTRING
Solyc07g006570.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g006570.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g006570.2.1Uncharacterized protein (243 aa)    
Predicted Functional Partners:
LOC543863
Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (421 aa)
       
      0.463
Solyc11g006860.1.1
Ribonuclease ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (297 aa)
           
  0.422
Solyc11g071530.1.1
Uncharacterized protein (205 aa)
       
      0.400
Solyc09g010030.1.1
Uncharacterized protein (194 aa)
       
      0.400
Solyc02g092300.1.1
Uncharacterized protein (166 aa)
       
      0.400
Solyc02g088760.2.1
Uncharacterized protein (219 aa)
       
      0.400
Solyc02g086740.1.1
Uncharacterized protein (186 aa)
       
      0.400
Solyc02g086730.1.1
Uncharacterized protein (190 aa)
       
      0.400
Solyc02g031970.1.1
Uncharacterized protein (215 aa)
       
      0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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