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Solyc07g006650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g006650.2.1" - Xylose isomerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g006650.2.1Xylose isomerase (398 aa)    
Predicted Functional Partners:
Solyc04g077040.2.1
Uncharacterized protein (559 aa)
 
   
  0.974
Solyc04g077030.2.1
Uncharacterized protein (575 aa)
 
   
  0.969
SDH
Sorbitol related enzyme (355 aa)
         
  0.907
Solyc11g042850.1.1
Uncharacterized protein (325 aa)
         
  0.903
FRK4
Fructokinase (375 aa)
         
  0.903
FRK2
Fructokinase-2 ; May play an important role in maintaining the flux of carbon towards starch formation (328 aa)
         
  0.903
Frk1
Fructokinase (347 aa)
         
  0.903
LOC543890
Fructokinase 3 (389 aa)
         
  0.903
HXK3
Hexokinase (499 aa)
         
    0.900
Solyc11g065220.1.1
Phosphotransferase (511 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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