STRINGSTRING
Solyc07g006890.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g006890.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g006890.1.1Uncharacterized protein (502 aa)    
Predicted Functional Partners:
Solyc12g096930.1.1
Uncharacterized protein (245 aa)
         
    0.900
Solyc09g090590.2.1
Uncharacterized protein (246 aa)
         
    0.900
Solyc04g007960.2.1
Uncharacterized protein (193 aa)
         
    0.900
Solyc04g005720.2.1
Uncharacterized protein (193 aa)
         
    0.900
Solyc01g005410.2.1
Uncharacterized protein (191 aa)
         
    0.900
Solyc01g005400.2.1
Uncharacterized protein (200 aa)
         
    0.900
Solyc11g065770.1.1
Uncharacterized protein (524 aa)
   
   
 
0.802
Solyc09g066150.1.1
Uncharacterized protein (502 aa)
   
   
 
0.802
Solyc03g111930.2.1
Uncharacterized protein (496 aa)
   
     
  0.662
Solyc10g087010.1.1
Uncharacterized protein (510 aa)
   
     
  0.661
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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