STRINGSTRING
Solyc07g007310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g007310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g007310.2.1Uncharacterized protein (341 aa)    
Predicted Functional Partners:
Solyc03g119700.2.1
Uncharacterized protein (159 aa)
   
      0.782
Solyc03g095620.2.1
Uncharacterized protein (537 aa)
   
 
  0.695
Solyc07g042150.2.1
Uncharacterized protein (309 aa)
     
 
  0.690
Solyc08g074280.2.1
Uncharacterized protein (956 aa)
   
 
  0.662
ABC1K3
ABC1-like kinase 3 (714 aa)
   
 
  0.662
Solyc04g005190.2.1
Uncharacterized protein (1055 aa)
         
  0.651
Solyc10g006790.2.1
Uncharacterized protein (638 aa)
   
 
  0.637
Solyc09g091580.2.1
Uncharacterized protein (785 aa)
   
 
  0.637
ABC1K1
ABC1-like kinase 1 (662 aa)
   
 
  0.637
Solyc08g068920.2.1
Uncharacterized protein (724 aa)
   
 
  0.637
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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