STRINGSTRING
Solyc07g007370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g007370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g007370.2.1Uncharacterized protein (570 aa)    
Predicted Functional Partners:
Solyc12g010410.1.1
Uncharacterized protein (329 aa)
       
      0.431
Solyc11g069890.1.1
Uncharacterized protein (580 aa)
       
      0.431
Solyc11g068950.1.1
Uncharacterized protein (661 aa)
       
      0.431
Solyc10g086640.1.1
Uncharacterized protein (258 aa)
       
      0.431
Solyc09g011380.2.1
Uncharacterized protein (504 aa)
       
      0.431
BL3
Hop-interacting protein THI035 (644 aa)
       
      0.431
THox2
Homeobox 2 protein (310 aa)
       
      0.431
Solyc08g065420.2.1
Uncharacterized protein (559 aa)
       
      0.431
Solyc08g041820.2.1
Uncharacterized protein (349 aa)
       
      0.431
T12
Homeobox protein knotted-1-like LET12 ; May have a role to play in formative events in ovule and embryo morphogenesis (431 aa)
       
      0.431
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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