STRINGSTRING
Solyc07g007810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g007810.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g007810.2.1Uncharacterized protein (710 aa)    
Predicted Functional Partners:
Solyc09g091980.2.1
Uncharacterized protein (205 aa)
     
  0.967
Solyc12g010680.1.1
Uncharacterized protein (155 aa)
     
  0.963
Solyc06g065230.2.1
Uncharacterized protein (174 aa)
       
  0.846
Solyc08g067440.1.1
Uncharacterized protein (162 aa)
       
  0.796
Solyc06g065570.2.1
Uncharacterized protein (165 aa)
       
  0.796
Solyc01g087900.2.1
Uncharacterized protein (189 aa)
       
  0.737
Solyc09g057910.2.1
Uncharacterized protein (544 aa)
     
   
  0.543
Solyc09g057920.2.1
Uncharacterized protein (509 aa)
     
   
  0.523
Solyc11g019910.1.1
Uncharacterized protein (196 aa)
           
  0.491
Solyc03g083660.1.1
Uncharacterized protein (194 aa)
           
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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