STRINGSTRING
Solyc07g007930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g007930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g007930.2.1Uncharacterized protein (875 aa)    
Predicted Functional Partners:
Solyc01g079300.2.1
Uncharacterized protein (869 aa)
         
0.900
Solyc04g009630.2.1
Uncharacterized protein (649 aa)
       
    0.900
Solyc02g069670.2.1
Uncharacterized protein (841 aa)
       
    0.900
Solyc03g121680.1.1
Uncharacterized protein (571 aa)
         
  0.900
Solyc10g085650.1.1
Uncharacterized protein (575 aa)
         
    0.900
Solyc10g085640.1.1
Uncharacterized protein (557 aa)
         
    0.900
Solyc10g085360.1.1
Uncharacterized protein (575 aa)
         
    0.900
LIN8
Cell-wall invertase (589 aa)
         
    0.900
Wiv-1
Cell-wall invertase (582 aa)
         
    0.900
LIN7
Cell-wall invertase (583 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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