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Solyc07g008270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g008270.2.1" - Ribosomal protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g008270.2.1Ribosomal protein (87 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc00g026870.1.1
Annotation not available (465 aa)
     
  0.997
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.997
Solyc08g067950.2.1
Uncharacterized protein (160 aa)
   
  0.990
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
   
  0.990
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
   
  0.990
Solyc10g047090.1.1
Uncharacterized protein (99 aa)
   
  0.990
Solyc10g018610.1.1
Uncharacterized protein (166 aa)
   
  0.990
Solyc08g075410.2.1
Ribosomal protein L2 (202 aa)
   
  0.990
Solyc05g023730.1.1
Uncharacterized protein (85 aa)
   
  0.990
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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