STRINGSTRING
Solyc07g008300.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g008300.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g008300.1.1Uncharacterized protein (410 aa)    
Predicted Functional Partners:
Solyc11g042640.1.1
Uncharacterized protein (276 aa)
   
  0.777
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
       
  0.644
Solyc12g099290.1.1
Uncharacterized protein (593 aa)
         
  0.624
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
    0.579
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
         
    0.510
Solyc06g071290.2.1
Putative betaine aldehyde dehyrogenase (504 aa)
         
  0.497
amadh2
Aminoaldehyde dehydrogenase 2 (505 aa)
         
  0.497
Glb2
Non-symbiotic hemoglobin 2 ; May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule (156 aa)
   
 
  0.489
Glb1
Non-symbiotic hemoglobin class 1 (152 aa)
       
  0.488
Solyc10g081440.1.1
NADH-cytochrome b5 reductase (278 aa)
       
  0.472
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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