STRINGSTRING
Solyc07g008340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g008340.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g008340.2.1Uncharacterized protein (578 aa)    
Predicted Functional Partners:
Solyc02g079060.2.1
Eukaryotic translation initiation factor 3 subunit J ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (222 aa)
     
 
  0.943
Solyc12g010520.1.1
Uncharacterized protein (405 aa)
     
 
  0.928
Solyc11g006660.1.1
Uncharacterized protein (437 aa)
     
 
  0.928
Solyc07g006130.1.1
Uncharacterized protein (405 aa)
     
 
  0.928
Solyc05g055210.1.1
Uncharacterized protein (437 aa)
     
 
  0.928
Solyc11g017070.1.1
Eukaryotic translation initiation factor 3 subunit I ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (326 aa)
     
      0.919
Solyc10g084670.1.1
Eukaryotic translation initiation factor 3 subunit 10 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (943 aa)
     
      0.914
Solyc09g010460.2.1
Eukaryotic translation initiation factor 3 subunit 10 ; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (1016 aa)
     
      0.914
Solyc09g091520.1.1
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
     
      0.911
Solyc06g076870.2.1
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
     
      0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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