STRINGSTRING
Solyc07g008560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g008560.2.1" - Purple acid phosphatase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g008560.2.1Purple acid phosphatase (636 aa)    
Predicted Functional Partners:
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.607
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
       
    0.540
Solyc06g072420.2.1
Uncharacterized protein (333 aa)
           
  0.426
Solyc04g008260.2.1
Uncharacterized protein (328 aa)
           
  0.426
Solyc04g008250.1.1
Uncharacterized protein (264 aa)
           
  0.426
Solyc03g098010.2.1
Uncharacterized protein (323 aa)
           
  0.426
Solyc05g008790.2.1
Uncharacterized protein (604 aa)
       
    0.412
Solyc03g006630.2.1
Uncharacterized protein (486 aa)
       
    0.412
Solyc02g079030.2.1
Uncharacterized protein (477 aa)
       
    0.412
Solyc01g096500.2.1
Uncharacterized protein (748 aa)
       
    0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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