STRINGSTRING
Solyc07g008880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g008880.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g008880.2.1Uncharacterized protein (2384 aa)    
Predicted Functional Partners:
Solyc06g069480.2.1
Uncharacterized protein (2088 aa)
     
  0.990
Solyc02g086580.2.1
Uncharacterized protein (1204 aa)
     
  0.990
Solyc07g054200.2.1
Uncharacterized protein (753 aa)
     
  0.989
Solyc10g080630.1.1
Uncharacterized protein (1393 aa)
     
  0.987
Solyc04g010260.2.1
Uncharacterized protein (1175 aa)
     
  0.987
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.987
Solyc04g016510.2.1
Uncharacterized protein (488 aa)
     
  0.986
Solyc10g081290.1.1
Uncharacterized protein (207 aa)
     
  0.985
Solyc10g081090.1.1
Uncharacterized protein (127 aa)
     
  0.985
Solyc10g081070.1.1
Uncharacterized protein (684 aa)
     
  0.985
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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