STRINGSTRING
HKT1;2 protein (Solanum lycopersicum) - STRING interaction network
"HKT1;2" - Sodium transporter HKT1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HKT1;2Sodium transporter HKT1;2 (391 aa)    
Predicted Functional Partners:
Solyc01g094290.2.1
Uncharacterized protein (1198 aa)
     
 
  0.794
LHA2
Plasma membrane ATPase 2 (956 aa)
         
  0.708
sos1
Na+/H+ antiporter (1151 aa)
     
 
  0.650
nhx4
Sodium/hydrogen exchanger (536 aa)
     
 
  0.610
nhx3
Sodium/hydrogen exchanger (537 aa)
     
 
  0.610
Solyc06g050170.2.1
Potassium transporter ; Potassium transporter (984 aa)
         
  0.527
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
              0.521
Solyc00g030210.1.1
Annotation not available (1147 aa)
         
  0.518
LKT1
Potassium channel (883 aa)
           
  0.517
Solyc06g051970.2.1
Uncharacterized protein (214 aa)
           
  0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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