STRINGSTRING
Solyc07g017260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g017260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g017260.2.1Uncharacterized protein (232 aa)    
Predicted Functional Partners:
Solyc06g008700.2.1
WD repeat-containing protein 4 homolog ; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit (434 aa)
     
 
  0.746
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
   
   
  0.737
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
 
  0.732
Solyc02g093460.2.1
Uncharacterized protein (539 aa)
     
  0.700
Solyc02g081810.2.1
Uncharacterized protein (597 aa)
     
  0.700
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
         
  0.690
Solyc10g008180.1.1
Uncharacterized protein (731 aa)
       
      0.596
Solyc10g008170.2.1
Uncharacterized protein (202 aa)
       
      0.596
Solyc07g053650.2.1
Uncharacterized protein (822 aa)
       
      0.596
Solyc07g056550.2.1
Uncharacterized protein (398 aa)
     
        0.593
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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