STRINGSTRING
Solyc07g017400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g017400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g017400.2.1Uncharacterized protein (321 aa)    
Predicted Functional Partners:
Solyc08g082700.2.1
Uncharacterized protein (267 aa)
     
  0.995
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
     
  0.995
Solyc09g018730.2.1
Ubiquitin carboxyl-terminal hydrolase (315 aa)
     
  0.994
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
     
  0.994
Solyc05g013030.1.1
Proteasome regulatory particle subunit (423 aa)
     
  0.994
Solyc02g084920.2.1
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
     
  0.994
Solyc12g044740.1.1
Uncharacterized protein (483 aa)
     
  0.993
Solyc10g044990.1.1
Uncharacterized protein (153 aa)
     
  0.992
Solyc01g111710.2.1
Uncharacterized protein (487 aa)
     
  0.992
Solyc01g111700.1.1
Uncharacterized protein (484 aa)
     
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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