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101263225 protein (Solanum lycopersicum) - STRING interaction network
"101263225" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
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[Homology]
Score
101263225Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (842 aa)    
Predicted Functional Partners:
101267975
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 12 growth stages; BEST Arabidopsis thaliana protein match is- Vacuolar sorting protein 9 /.../) domain (TAIR-AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (228 aa)
           
  0.654
3950375
Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation; Belongs to the PsbH family (73 aa)
           
  0.598
Solyc10g044560.1.1
annotation not available (174 aa)
       
 
  0.576
Solyc08g028870.1.1
annotation not available (78 aa)
       
 
  0.576
Solyc01g088470.2.1
Ribosomal L18p/L5e family protein (145 aa)
     
   
  0.557
Solyc10g044550.1.1
annotation not available (81 aa)
           
  0.551
3950473
ATP synthase subunit c, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (81 aa)
           
  0.551
Solyc08g028860.1.1
annotation not available (81 aa)
           
  0.551
Solyc08g077140.1.1
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (270 aa)
     
   
  0.507
Solyc08g077120.2.1
annotation not available (221 aa)
     
   
  0.507
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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