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Solyc07g018290.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g018290.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g018290.2.1Uncharacterized protein; AINTEGUMENTA-like 5 (468 aa)    
Predicted Functional Partners:
ail
IDS4-like protein (266 aa)
           
  0.730
101244788
annotation not available (1082 aa)
           
  0.603
101259524
annotation not available (1105 aa)
           
  0.603
101244009
annotation not available (620 aa)
     
   
  0.581
ABI3
Uncharacterized protein; ABI3 (579 aa)
     
   
  0.581
wus
Protein WUSCHEL; Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity) (272 aa)
           
  0.578
Solyc12g089270.1.1
annotation not available (148 aa)
           
  0.568
101257659
annotation not available (149 aa)
           
  0.568
101260573
Uncharacterized protein; AGAMOUS-like 15 (271 aa)
           
  0.567
ARF5
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (930 aa)
           
  0.565
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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