STRINGSTRING
RPA32a protein (Solanum lycopersicum) - STRING interaction network
RPA32a in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA32aRPA32a (272 aa)    
Predicted Functional Partners:
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
  0.982
Solyc06g034070.1.1
Uncharacterized protein (1557 aa)
     
  0.982
Solyc03g115050.2.1
Uncharacterized protein (614 aa)
     
  0.981
Solyc12g038200.1.1
Uncharacterized protein (519 aa)
     
  0.981
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
     
  0.981
Solyc08g075840.2.1
Uncharacterized protein (899 aa)
     
  0.981
Solyc07g032800.1.1
Uncharacterized protein (228 aa)
     
  0.981
Solyc06g034260.1.1
Uncharacterized protein (239 aa)
     
  0.981
Solyc05g025590.2.1
Uncharacterized protein (636 aa)
     
  0.981
Solyc03g121160.1.1
Uncharacterized protein (258 aa)
     
  0.981
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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