• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101247629 protein (Solanum lycopersicum) - STRING interaction network
"101247629" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101247629annotation not available (388 aa)    
Predicted Functional Partners:
101257209
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species /.../ae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (393 aa)
           
  0.764
101251825
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (437 aa)
           
  0.764
101261702
FKBP12 interacting protein 37 (342 aa)
           
  0.762
101246455
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (371 aa)
           
  0.745
101257877
annotation not available (362 aa)
           
  0.745
Solyc01g096610.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknow /.../tion DUF667 (InterPro-IPR007714); Has 373 Blast hits to 371 proteins in 116 species- Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source- NCBI BLink) (233 aa)
           
  0.739
Solyc10g038030.1.1
annotation not available (110 aa)
           
  0.693
101246695
annotation not available (331 aa)
           
  0.693
101245443
annotation not available (618 aa)
           
  0.687
101266256
annotation not available (574 aa)
           
  0.687
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]