STRINGSTRING
Solyc07g019620.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g019620.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g019620.1.1Uncharacterized protein (115 aa)    
Predicted Functional Partners:
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
  0.987
Solyc05g009220.2.1
Uncharacterized protein (790 aa)
   
  0.901
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.900
Solyc01g102410.2.1
Uncharacterized protein (740 aa)
   
  0.896
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
   
  0.876
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
   
  0.865
Solyc02g069140.1.1
Uncharacterized protein (1041 aa)
   
  0.848
LARS
leucine--tRNA ligase, cytoplasmic (1079 aa)
   
  0.848
Solyc06g068320.2.1
Uncharacterized protein (515 aa)
     
  0.824
Solyc03g117330.2.1
Uncharacterized protein (504 aa)
     
  0.824
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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