STRINGSTRING
Solyc07g020870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g020870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g020870.1.1Uncharacterized protein (1110 aa)    
Predicted Functional Partners:
Solyc06g072980.2.1
Uncharacterized protein (564 aa)
       
 
  0.535
Solyc03g096790.2.1
Uncharacterized protein (604 aa)
       
 
  0.535
Solyc01g096490.2.1
Uncharacterized protein (1633 aa)
     
 
  0.500
Solyc10g084820.1.1
Palmitoyltransferase (284 aa)
     
 
  0.466
Solyc10g018160.1.1
Palmitoyltransferase (308 aa)
     
 
  0.466
Solyc05g055630.2.1
Palmitoyltransferase (276 aa)
     
 
  0.466
Solyc05g047640.2.1
Palmitoyltransferase (218 aa)
     
 
  0.466
Solyc05g047610.2.1
Uncharacterized protein (161 aa)
     
 
  0.466
Solyc01g091280.2.1
Palmitoyltransferase (309 aa)
     
 
  0.466
Solyc11g005660.1.1
Uncharacterized protein (280 aa)
     
 
  0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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