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STRINGSTRING
Solyc07g021120.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g021120.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g021120.1.1annotation not available (1012 aa)    
Predicted Functional Partners:
101252841
annotation not available (466 aa)
       
 
  0.900
101265674
Unknown protein; Has 32 Blast hits to 32 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (116 aa)
           
  0.851
RPA32b
annotation not available (280 aa)
       
 
  0.754
RPA32a
annotation not available (272 aa)
       
 
  0.754
101260670
Uncharacterized protein; KU70 homolog (624 aa)
           
  0.740
101247285
annotation not available (300 aa)
           
  0.648
101263059
annotation not available (300 aa)
           
  0.648
100147728
Telomere binding protein (689 aa)
           
  0.620
101255981
annotation not available (667 aa)
           
  0.620
101263904
annotation not available (373 aa)
           
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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