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STRINGSTRING
101254007 protein (Solanum lycopersicum) - STRING interaction network
"101254007" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101254007annotation not available (456 aa)    
Predicted Functional Partners:
Solyc02g094460.1.1
Uncharacterized protein; AP2/B3-like transcriptional factor family protein (274 aa)
       
      0.842
101250359
Ribosomal protein L21 (264 aa)
           
  0.742
101248356
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (302 aa)
           
  0.694
HrBP1
Harpin binding protein 1 (276 aa)
           
  0.689
101262213
Uncharacterized protein; FAD/NAD(P)-binding oxidoreductase (302 aa)
           
  0.593
101260974
Uncharacterized protein; Plasma-membrane associated cation-binding protein 1 (201 aa)
           
  0.564
101250811
Ribosomal protein L21 (212 aa)
           
  0.560
101254500
annotation not available (104 aa)
           
  0.532
101251077
annotation not available (104 aa)
           
  0.532
101255927
annotation not available (168 aa)
           
  0.406
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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