STRINGSTRING
Solyc07g021640.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g021640.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g021640.1.1Uncharacterized protein (147 aa)    
Predicted Functional Partners:
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
   
   
  0.692
Solyc10g079060.1.1
Uncharacterized protein (427 aa)
   
 
  0.601
Solyc10g079040.1.1
Uncharacterized protein (310 aa)
   
 
  0.601
Solyc10g054130.1.1
Uncharacterized protein (436 aa)
   
 
  0.601
Solyc08g007440.1.1
Uncharacterized protein (303 aa)
   
 
  0.601
Psy1
Phytoene synthase 1, chloroplastic ; Catalyzes the reaction from prephytoene diphosphate to phytoene (412 aa)
   
 
  0.601
PSY2
Phytoene synthase 2, chloroplastic ; Catalyzes the reaction from prephytoene diphosphate to phytoene (438 aa)
   
 
  0.601
Solyc01g110290.2.1
Squalene synthase (411 aa)
   
 
  0.601
Solyc01g005940.2.1
Uncharacterized protein (384 aa)
   
 
  0.601
Solyc10g079480.1.1
Uncharacterized protein (500 aa)
   
     
  0.575
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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