• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g021670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g021670.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g021670.1.1annotation not available (60 aa)    
Predicted Functional Partners:
101267748
Uncharacterized protein; SUMO-activating enzyme 2 (650 aa)
   
 
  0.932
UBC1
Ubiquitin conjugating enzyme ; Belongs to the ubiquitin-conjugating enzyme family (194 aa)
     
 
  0.918
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.895
101262030
RING/U-box superfamily protein (255 aa)
     
 
  0.887
LOC543732
Uncharacterized protein; Ubiquitin activating enzyme (318 aa)
   
 
  0.882
Solyc03g019730.2.1
annotation not available (346 aa)
   
 
  0.882
101256036
RAN GTPase activating protein 1 (534 aa)
     
 
  0.870
101248044
annotation not available (550 aa)
     
 
  0.870
Solyc06g010100.1.1
annotation not available (855 aa)
     
 
  0.837
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
       
 
  0.837
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]