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Solyc07g022900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g022900.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g022900.2.1Uncharacterized protein (262 aa)    
Predicted Functional Partners:
SBPase
Chloroplast sedoheptulose-1,7-bisphosphatase (394 aa)
     
   
  0.621
Solyc03g031700.2.1
Uncharacterized protein (548 aa)
           
  0.502
Solyc02g080440.2.1
Uncharacterized protein (546 aa)
           
  0.502
Solyc01g109040.2.1
Uncharacterized protein (120 aa)
     
   
  0.493
PSBS
Photosystem II 22 kDa protein, chloroplastic ; Seems to be involved in non-photochemical quenching, a process maintains the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage (276 aa)
     
   
  0.444
Solyc09g083190.2.1
Uncharacterized protein (216 aa)
     
   
  0.444
Solyc10g008930.1.1
Uncharacterized protein (127 aa)
           
  0.424
Solyc07g053550.1.1
Uncharacterized protein (148 aa)
           
  0.424
Solyc02g080570.2.1
Starch synthase III (1230 aa)
           
  0.424
RBCS-2A
Ribulose bisphosphate carboxylase small chain 2A, chloroplastic ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity) (180 aa)
     
   
  0.411
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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