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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g032740.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g032740.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g032740.2.1annotation not available (357 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
annotation not available (399 aa)
   
   
  0.873
ldh1
L-lactate dehydrogenase ; Belongs to the LDH/MDH superfamily (350 aa)
     
 
  0.813
ldh
L-lactate dehydrogenase ; Belongs to the LDH/MDH superfamily (347 aa)
     
 
  0.813
101248896
annotation not available (238 aa)
           
  0.809
Solyc04g011510.2.1
Uncharacterized protein; Triosephosphate isomerase (259 aa)
     
 
  0.798
LOC544261
Glutathione peroxidase ; Belongs to the glutathione peroxidase family (167 aa)
     
   
  0.793
Solyc11g011930.1.1
annotation not available (420 aa)
     
 
  0.792
Solyc02g086610.2.1
Isocitrate/isopropylmalate dehydrogenase family protein; Belongs to the isocitrate and isopropylmalate dehydrogenases family (471 aa)
     
 
  0.792
101268602
annotation not available (415 aa)
     
 
  0.787
101250846
annotation not available (312 aa)
     
 
  0.756
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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