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Solyc07g038130.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g038130.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g038130.1.1annotation not available (81 aa)    
Predicted Functional Partners:
101260937
Uncharacterized protein; methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS); Belongs to the class-I aminoacyl-tRNA synthetase family (619 aa)
       
      0.741
101254097
annotation not available (401 aa)
           
  0.695
101247960
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (524 aa)
           
  0.695
101248046
annotation not available (502 aa)
           
  0.553
101247752
annotation not available (502 aa)
           
  0.553
101258717
annotation not available (406 aa)
           
  0.489
101249743
annotation not available (400 aa)
           
  0.489
101260840
annotation not available (171 aa)
           
  0.489
Solyc02g063470.1.1
annotation not available (315 aa)
           
  0.489
101268787
annotation not available (529 aa)
           
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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