STRINGSTRING
Solyc07g040740.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g040740.2.1" - O-acyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g040740.2.1O-acyltransferase (514 aa)    
Predicted Functional Partners:
Solyc02g068240.2.1
Uncharacterized protein (333 aa)
       
  0.962
Solyc10g084540.1.1
Uncharacterized protein (1563 aa)
     
  0.941
Solyc09g005910.2.1
Uncharacterized protein (892 aa)
     
  0.941
Solyc04g079100.2.1
Uncharacterized protein (965 aa)
     
  0.941
Solyc10g079770.1.1
Uncharacterized protein (445 aa)
         
  0.935
Solyc10g079410.1.1
Uncharacterized protein (826 aa)
         
  0.935
Solyc10g085100.1.1
Uncharacterized protein (504 aa)
     
 
  0.912
Solyc09g014300.2.1
Uncharacterized protein (506 aa)
     
 
    0.912
Solyc08g006640.2.1
Uncharacterized protein (532 aa)
         
  0.901
Solyc12g039180.1.1
Diacylglycerol kinase (737 aa)
     
 
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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