STRINGSTRING
Solyc07g040750.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g040750.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g040750.1.1Uncharacterized protein (413 aa)    
Predicted Functional Partners:
Solyc03g093680.2.1
Mago nashi protein (151 aa)
     
  0.974
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
   
  0.970
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
   
  0.970
Solyc12g009960.1.1
Uncharacterized protein (773 aa)
     
  0.960
Solyc08g077700.2.1
Uncharacterized protein (1648 aa)
     
  0.960
Solyc07g005810.2.1
Uncharacterized protein (773 aa)
     
  0.960
Solyc07g005780.1.1
Uncharacterized protein (450 aa)
     
  0.960
Solyc01g088700.2.1
Uncharacterized protein (1805 aa)
     
  0.960
Y14
RNA-binding protein 8A (195 aa)
     
  0.956
Solyc10g044450.1.1
Uncharacterized protein (481 aa)
       
  0.931
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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