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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101260155 protein (Solanum lycopersicum) - STRING interaction network
"101260155" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101260155annotation not available (323 aa)    
Predicted Functional Partners:
Solyc04g082980.1.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (1053 aa)
       
 
  0.928
Solyc03g115240.2.1
Leo1-like family protein (622 aa)
       
 
  0.927
101258962
Uncharacterized protein; PLANT HOMOLOGOUS TO PARAFIBROMIN (393 aa)
     
 
  0.866
Solyc07g041550.2.1
annotation not available (415 aa)
     
 
  0.866
Solyc07g041510.1.1
annotation not available (697 aa)
     
 
  0.866
101264125
RNA helicase, ATP-dependent, SK12/DOB1 protein (1361 aa)
     
 
  0.844
101254885
Hydroxyproline-rich glycoprotein family protein (698 aa)
       
 
  0.826
Solyc03g121000.2.1
annotation not available (326 aa)
       
 
  0.826
101246693
annotation not available (323 aa)
   
   
 
0.801
Solyc08g081590.1.1
Uncharacterized protein; Sporulation 11-2 (251 aa)
       
 
  0.796
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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