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STRINGSTRING
101264345 protein (Solanum lycopersicum) - STRING interaction network
"101264345" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264345Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (896 aa)    
Predicted Functional Partners:
Solyc10g054730.1.1
annotation not available (442 aa)
           
  0.745
101259881
BEST Arabidopsis thaliana protein match is- Calcium-binding EF hand family protein (TAIR-AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink) (184 aa)
           
  0.745
101266359
annotation not available (162 aa)
           
  0.651
101268194
annotation not available (143 aa)
           
  0.651
Solyc01g091150.2.1
annotation not available (102 aa)
           
  0.651
Solyc01g091020.2.1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (235 aa)
           
  0.651
101259808
annotation not available (339 aa)
           
  0.594
Solyc01g008820.2.1
annotation not available (338 aa)
           
  0.594
Solyc01g090940.2.1
annotation not available (416 aa)
           
  0.588
100316879
Calcium-dependent protein kinase (565 aa)
           
  0.531
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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