STRINGSTRING
Solyc07g042380.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042380.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042380.2.1Uncharacterized protein (1248 aa)    
Predicted Functional Partners:
Solyc03g051900.2.1
Uncharacterized protein (1979 aa)
     
 
  0.996
Solyc04g082330.2.1
Uncharacterized protein (791 aa)
     
 
  0.996
Solyc04g051670.2.1
Uncharacterized protein (1030 aa)
     
      0.996
Solyc01g109990.2.1
Uncharacterized protein (1012 aa)
     
 
  0.995
BMS1
Ribosome biogenesis protein BMS1 homolog (1231 aa)
     
 
  0.994
Solyc05g011990.2.1
Uncharacterized protein (940 aa)
     
 
  0.994
Solyc03g093480.2.1
Uncharacterized protein (2149 aa)
     
 
  0.994
Solyc01g095710.2.1
Uncharacterized protein (1341 aa)
     
 
  0.994
Solyc07g066410.2.1
Uncharacterized protein (810 aa)
     
      0.994
Solyc05g010480.2.1
Uncharacterized protein (396 aa)
     
      0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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