STRINGSTRING
Solyc07g042440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042440.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042440.2.1Uncharacterized protein (213 aa)    
Predicted Functional Partners:
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
 
 
0.874
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
 
 
0.873
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
 
 
0.711
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
 
  0.696
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
 
  0.691
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.607
Solyc04g081970.2.1
Uncharacterized protein (296 aa)
   
 
  0.590
Solyc12g009600.1.1
Uncharacterized protein (210 aa)
     
        0.590
Solyc03g005190.2.1
Uncharacterized protein (293 aa)
   
   
  0.587
Solyc02g087630.2.1
Uncharacterized protein (169 aa)
   
 
  0.586
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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