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STRINGSTRING
Solyc07g042460.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042460.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042460.1.1annotation not available (881 aa)    
Predicted Functional Partners:
Solyc10g081740.1.1
annotation not available (499 aa)
     
 
    0.605
101263840
annotation not available (598 aa)
     
 
    0.605
101255379
annotation not available (535 aa)
         
    0.600
101247097
annotation not available (533 aa)
         
    0.600
101261579
annotation not available (529 aa)
         
    0.600
101245018
annotation not available (505 aa)
         
    0.600
101256827
annotation not available (578 aa)
         
    0.600
101264775
annotation not available (579 aa)
         
    0.600
101260188
annotation not available (525 aa)
         
    0.600
Solyc10g076900.1.1
annotation not available (501 aa)
         
    0.600
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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