STRINGSTRING
Solyc07g042460.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042460.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042460.1.1Uncharacterized protein (881 aa)    
Predicted Functional Partners:
Solyc12g099790.1.1
Uncharacterized protein (535 aa)
         
    0.800
Solyc11g065660.1.1
Uncharacterized protein (533 aa)
         
    0.800
Solyc11g064900.1.1
Uncharacterized protein (529 aa)
         
    0.800
Solyc11g018610.1.1
Uncharacterized protein (505 aa)
         
    0.800
Solyc11g006370.1.1
Uncharacterized protein (578 aa)
         
    0.800
Solyc10g081740.1.1
Uncharacterized protein (499 aa)
         
    0.800
Solyc10g081640.1.1
Uncharacterized protein (579 aa)
         
    0.800
Solyc10g079130.1.1
Uncharacterized protein (525 aa)
         
    0.800
Solyc10g076900.1.1
Uncharacterized protein (501 aa)
         
    0.800
Solyc10g074570.1.1
Uncharacterized protein (557 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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