STRINGSTRING
Solyc07g042620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042620.2.1Uncharacterized protein (126 aa)    
Predicted Functional Partners:
Solyc01g008270.2.1
Uncharacterized protein (147 aa)
     
 
  0.998
Solyc01g097300.2.1
Prefoldin subunit 4 ; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (128 aa)
     
 
  0.970
Solyc08g016420.2.1
Uncharacterized protein (130 aa)
     
 
  0.937
Solyc06g053460.1.1
Uncharacterized protein (123 aa)
     
 
  0.919
Solyc05g053390.2.1
Prefoldin subunit 3 ; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (192 aa)
     
      0.905
Solyc01g058650.2.1
Uncharacterized protein (61 aa)
     
      0.905
Solyc11g071720.1.1
Uncharacterized protein (322 aa)
       
      0.598
Solyc11g045460.1.1
Uncharacterized protein (247 aa)
       
      0.598
Solyc10g054780.1.1
Uncharacterized protein (346 aa)
       
      0.598
Solyc10g050880.1.1
Uncharacterized protein (312 aa)
       
      0.598
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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