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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc07g042660.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042660.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042660.1.1annotation not available (173 aa)    
Predicted Functional Partners:
101245890
annotation not available (394 aa)
   
 
  0.741
101268295
Uncharacterized protein; HIS HF; Belongs to the HisA/HisF family (588 aa)
   
 
  0.712
101253226
annotation not available (288 aa)
   
 
  0.687
101252814
Uncharacterized protein; Chromatin remodeling 8 (1213 aa)
   
 
  0.648
101250407
Aldolase-type TIM barrel family protein (312 aa)
   
   
  0.613
Solyc11g040030.1.1
annotation not available (176 aa)
   
   
  0.583
101260925
annotation not available (414 aa)
   
   
  0.583
Solyc10g005930.1.1
Histidine biosynthesis bifunctional protein (HISIE) (217 aa)
   
   
  0.524
Solyc03g095690.2.1
annotation not available (304 aa)
   
 
  0.495
Solyc08g077610.1.1
annotation not available (669 aa)
   
 
  0.488
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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