STRINGSTRING
Solyc07g042920.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042920.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042920.1.1Uncharacterized protein (285 aa)    
Predicted Functional Partners:
Solyc08g016750.2.1
Uncharacterized protein (408 aa)
 
  0.997
Solyc04g008590.2.1
Uncharacterized protein (408 aa)
 
  0.997
Solyc05g024160.2.1
Uncharacterized protein (371 aa)
 
  0.997
Solyc06g072580.2.1
Uncharacterized protein (367 aa)
 
  0.997
Solyc03g097680.2.1
Uncharacterized protein (369 aa)
 
  0.997
Solyc11g017250.1.1
Uncharacterized protein (468 aa)
 
  0.993
Solyc05g009530.2.1
Uncharacterized protein (459 aa)
 
  0.993
Solyc07g006790.2.1
Acetyltransferase component of pyruvate dehydrogenase complex ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (553 aa)
 
  0.992
Solyc11g007720.1.1
Uncharacterized protein (644 aa)
 
  0.992
Solyc01g028900.2.1
Uncharacterized protein (358 aa)
 
  0.987
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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