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STRINGSTRING
Solyc07g042920.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc07g042920.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc07g042920.1.1annotation not available (285 aa)    
Predicted Functional Partners:
101268205
annotation not available (408 aa)
   
 
  0.980
101252977
annotation not available (408 aa)
   
 
  0.980
101266731
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 (367 aa)
   
 
  0.977
Solyc05g024160.2.1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 (371 aa)
   
 
  0.977
Solyc03g097680.2.1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2 (369 aa)
   
 
  0.977
101264480
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; 2-oxoacid dehydrogenases acyltransferase family protein (468 aa)
   
 
  0.965
101257857
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; 2-oxoacid dehydrogenases acyltransferase family protein (459 aa)
   
 
  0.964
101244498
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (553 aa)
   
 
  0.963
101257033
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Dihydrolipoamide acetyltransferase, long form protein (644 aa)
   
 
  0.962
101249536
annotation not available (367 aa)
     
 
  0.831
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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