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STRINGSTRING
101257682 protein (Solanum lycopersicum) - STRING interaction network
"101257682" - Pectinesterase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257682Pectinesterase; Pectin lyase-like superfamily protein (389 aa)    
Predicted Functional Partners:
101267731
Uncharacterized protein; Methyltransferases (510 aa)
           
  0.882
101250734
Cox19 family protein (CHCH motif) (72 aa)
           
  0.878
101264715
Uncharacterized protein; Vps51/Vps67 family (components of vesicular transport) protein (756 aa)
           
  0.852
Solyc02g069080.2.1
BEST Arabidopsis thaliana protein match is- exocyst complex component 84B (TAIR-AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source /.../ BLink) (774 aa)
           
  0.780
101255858
annotation not available (472 aa)
           
  0.764
Solyc09g066280.2.1
Uncharacterized protein; Conserved peptide upstream open reading frame 7 (604 aa)
           
  0.764
LOC778232
Uncharacterized protein; Prf interactor 30137 (740 aa)
           
  0.764
101261316
Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family (490 aa)
   
     
  0.650
Solyc12g096290.1.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (765 aa)
           
  0.648
101268139
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (804 aa)
           
  0.648
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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